The following is the Master HCC Gene List from our analysis.
| Symbol | Entrez Gene Name |
| ACLY | ATP citrate lyase |
| ACP1 | acid phosphatase 1, soluble |
| ACTL6A | actin-like 6A |
| ACTN4 | actinin, alpha 4 |
| ADAM10 | ADAM metallopeptidase domain 10 |
| ALG3 | asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae) |
| ANLN | anillin, actin binding protein |
| ANP32B | acidic (leucine-rich) nuclear phosphoprotein 32 family, member B |
| ANXA2 | annexin A2 |
| AP3S1 | adaptor-related protein complex 3, sigma 1 subunit |
| APEX1 | APEX nuclease (multifunctional DNA repair enzyme) 1 |
| ARHGAP12 | Rho GTPase activating protein 12 |
| ARID3A | AT rich interactive domain 3A (BRIGHT-like) |
| ARMC1 | armadillo repeat containing 1 |
| ASPM | asp (abnormal spindle) homolog, microcephaly associated (Drosophila) |
| ATAD2 | ATPase family, AAA domain containing 2 |
| ATP6V1F | ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F |
| AURKA | aurora kinase A |
| AURKB | aurora kinase B |
| BANF1 | barrier to autointegration factor 1 |
| BIRC5 | baculoviral IAP repeat containing 5 |
| BRP44 | brain protein 44 |
| BUB1 | budding uninhibited by benzimidazoles 1 homolog (yeast) |
| BUB1B | budding uninhibited by benzimidazoles 1 homolog beta (yeast) |
| BUB3 | budding uninhibited by benzimidazoles 3 homolog (yeast) |
| CACYBP | calcyclin binding protein |
| CANX | calnexin |
| CAPNS1 | calpain, small subunit 1 |
| CAPZA2 | capping protein (actin filament) muscle Z-line, alpha 2 |
| CBX1 | chromobox homolog 1 |
| CCDC34 | coiled-coil domain containing 34 |
| CCDC99 | coiled-coil domain containing 99 |
| CCNA2 | cyclin A2 |
| CCNB1 | cyclin B1 |
| CCNB2 | cyclin B2 |
| CCT3 | chaperonin containing TCP1, subunit 3 (gamma) |
| CCT4 | chaperonin containing TCP1, subunit 4 (delta) |
| CCT5 | chaperonin containing TCP1, subunit 5 (epsilon) |
| CCT6A | chaperonin containing TCP1, subunit 6A (zeta 1) |
| CDC23 | cell division cycle 23 homolog (S. cerevisiae) |
| CDC25B | cell division cycle 25 homolog B (S. pombe) |
| CDC45 | cell division cycle 45 homolog (S. cerevisiae) |
| CDC6 | cell division cycle 6 homolog (S. cerevisiae) |
| CDC7 | cell division cycle 7 homolog (S. cerevisiae) |
| CDCA2 | cell division cycle associated 2 |
| CDCA3 | cell division cycle associated 3 |
| CDCA5 | cell division cycle associated 5 |
| CDK1 | cyclin-dependent kinase 1 |
| CDK4 | cyclin-dependent kinase 4 |
| CDKN2A | cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) |
| CDKN2C | cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) |
| CDKN3 | cyclin-dependent kinase inhibitor 3 |
| CENPE | centromere protein E, 312kDa |
| CENPF | centromere protein F, 350/400kDa (mitosin) |
| CENPL | centromere protein L |
| CENPM | centromere protein M |
| CGGBP1 | CGG triplet repeat binding protein 1 |
| CHEK1 | CHK1 checkpoint homolog (S. pombe) |
| CHMP2A | chromatin modifying protein 2A |
| CIT | citron (rho-interacting, serine/threonine kinase 21) |
| CKAP2 | cytoskeleton associated protein 2 |
| CKAP4 | cytoskeleton-associated protein 4 |
| CKAP5 | cytoskeleton associated protein 5 |
| CKS1B | CDC28 protein kinase regulatory subunit 1B |
| CKS2 | CDC28 protein kinase regulatory subunit 2 |
| CLIC1 | chloride intracellular channel 1 |
| COPB1 | coatomer protein complex, subunit beta 1 |
| COPS5 | COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis) |
| COX7A2L | cytochrome c oxidase subunit VIIa polypeptide 2 like |
| CTNNA1 | catenin (cadherin-associated protein), alpha 1, 102kDa |
| CUL4A | cullin 4A |
| CYP2R1 | cytochrome P450, family 2, subfamily R, polypeptide 1 |
| DAP3 | death associated protein 3 |
| DDAH2 | dimethylarginine dimethylaminohydrolase 2 |
| DEK | DEK oncogene |
| DIAPH3 | diaphanous homolog 3 (Drosophila) |
| DNAJC9 | DnaJ (Hsp40) homolog, subfamily C, member 9 |
| DRAM2 | DNA-damage regulated autophagy modulator 2 |
| DRG1 | developmentally regulated GTP binding protein 1 |
| DTL | denticleless homolog (Drosophila) |
| DVL3 | dishevelled, dsh homolog 3 (Drosophila) |
| E2F1 | E2F transcription factor 1 |
| E2F8 | E2F transcription factor 8 |
| ECT2 | epithelial cell transforming sequence 2 oncogene |
| EED | embryonic ectoderm development |
| EFTUD2 | elongation factor Tu GTP binding domain containing 2 |
| EIF1AY | eukaryotic translation initiation factor 1A, Y-linked |
| EIF2B1 | eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa |
| EIF2S2 | eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa |
| EIF5B | eukaryotic translation initiation factor 5B |
| ENAH | enabled homolog (Drosophila) |
| EPRS | glutamyl-prolyl-tRNA synthetase |
| ESYT1 | extended synaptotagmin-like protein 1 |
| EXO1 | exonuclease 1 |
| EZH2 | enhancer of zeste homolog 2 (Drosophila) |
| FADS1 | fatty acid desaturase 1 |
| FAM50A | family with sequence similarity 50, member A |
| FANCG | Fanconi anemia, complementation group G |
| FDPS | farnesyl diphosphate synthase |
| FEN1 | flap structure-specific endonuclease 1 |
| FIBP | fibroblast growth factor (acidic) intracellular binding protein |
| FLAD1 | FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) |
| FNBP1L | formin binding protein 1-like |
| FOXM1 | forkhead box M1 |
| GARS | glycyl-tRNA synthetase |
| GBF1 | golgi brefeldin A resistant guanine nucleotide exchange factor 1 |
| GCN1L1 | GCN1 general control of amino-acid synthesis 1-like 1 (yeast) |
| GINS1 | GINS complex subunit 1 (Psf1 homolog) |
| GLB1 | galactosidase, beta 1 |
| GMNN | geminin, DNA replication inhibitor |
| GNPAT | glyceronephosphate O-acyltransferase |
| GPC3 | glypican 3 |
| GPSM2 | G-protein signaling modulator 2 |
| GPX7 | glutathione peroxidase 7 |
| GTF2A2 | general transcription factor IIA, 2, 12kDa |
| H2AFX | H2A histone family, member X |
| H2AFZ | H2A histone family, member Z |
| HAT1 | histone acetyltransferase 1 |
| HAX1 | HCLS1 associated protein X-1 |
| HCFC1 | host cell factor C1 (VP16-accessory protein) |
| HDAC1 | histone deacetylase 1 |
| HDGF | hepatoma-derived growth factor |
| HELLS | helicase, lymphoid-specific |
| HMGA1 | high mobility group AT-hook 1 |
| HMGB2 | high-mobility group box 2 |
| HMGN4 | high mobility group nucleosomal binding domain 4 |
| HN1 | hematological and neurological expressed 1 |
| IARS | isoleucyl-tRNA synthetase |
| IDI1 | isopentenyl-diphosphate delta isomerase 1 |
| IK | IK cytokine, down-regulator of HLA II |
| ILF2 | interleukin enhancer binding factor 2, 45kDa |
| ILF3 | interleukin enhancer binding factor 3, 90kDa |
| IMPDH2 | IMP (inosine 5′-monophosphate) dehydrogenase 2 |
| INCENP | inner centromere protein antigens 135/155kDa |
| INTS7 | integrator complex subunit 7 |
| ITGB3BP | integrin beta 3 binding protein (beta3-endonexin) |
| KDELR1 | KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 |
| KIAA0101 | KIAA0101 |
| KIF11 | kinesin family member 11 |
| KIF14 | kinesin family member 14 |
| KIF20A | kinesin family member 20A |
| KIF23 | kinesin family member 23 |
| KIF2C | kinesin family member 2C |
| KIF4A | kinesin family member 4A |
| KIF5B | kinesin family member 5B |
| KIN | KIN, antigenic determinant of recA protein homolog (mouse) |
| KNTC1 | kinetochore associated 1 |
| KPNA2 | karyopherin alpha 2 (RAG cohort 1, importin alpha 1) |
| KPNB1 | karyopherin (importin) beta 1 |
| LBR | lamin B receptor |
| LETM1 | leucine zipper-EF-hand containing transmembrane protein 1 |
| LGALS1 | lectin, galactoside-binding, soluble, 1 |
| LIG1 | ligase I, DNA, ATP-dependent |
| LIG3 | ligase III, DNA, ATP-dependent |
| LOC100287429/ZNF84 | zinc finger protein 84 |
| LPCAT1 | lysophosphatidylcholine acyltransferase 1 |
| LRRC59 | leucine rich repeat containing 59 |
| LSM4 | LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) |
| LTA4H | leukotriene A4 hydrolase |
| MAD2L1 | MAD2 mitotic arrest deficient-like 1 (yeast) |
| MANF | mesencephalic astrocyte-derived neurotrophic factor |
| MAP3K7 | mitogen-activated protein kinase kinase kinase 7 |
| MAP4K4 | mitogen-activated protein kinase kinase kinase kinase 4 |
| MAPK6 | mitogen-activated protein kinase 6 |
| MAPKAPK5 | mitogen-activated protein kinase-activated protein kinase 5 |
| MARCKS | myristoylated alanine-rich protein kinase C substrate |
| MAZ | MYC-associated zinc finger protein (purine-binding transcription factor) |
| MCM3 | minichromosome maintenance complex component 3 |
| MCM4 | minichromosome maintenance complex component 4 |
| MCM6 | minichromosome maintenance complex component 6 |
| MCM7 | minichromosome maintenance complex component 7 |
| MCM7 | minichromosome maintenance complex component 7 |
| MDK | midkine (neurite growth-promoting factor 2) |
| MELK | maternal embryonic leucine zipper kinase |
| MESDC2 | mesoderm development candidate 2 |
| MGAT4B | mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B |
| MKI67 | antigen identified by monoclonal antibody Ki-67 |
| MLF1IP | MLF1 interacting protein |
| MORF4L2 | mortality factor 4 like 2 |
| MRPL13 | mitochondrial ribosomal protein L13 |
| MRPL3 | mitochondrial ribosomal protein L3 |
| MRPL45 | mitochondrial ribosomal protein L45 |
| MRPS12 | mitochondrial ribosomal protein S12 |
| MRPS14 | mitochondrial ribosomal protein S14 |
| MSH2 | mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) |
| MSH6 | mutS homolog 6 (E. coli) |
| MYBL2 | v-myb myeloblastosis viral oncogene homolog (avian)-like 2 |
| NAB2 | NGFI-A binding protein 2 (EGR1 binding protein 2) |
| NCAPG | non-SMC condensin I complex, subunit G |
| NCAPG2 | non-SMC condensin II complex, subunit G2 |
| NDUFB3 | NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa |
| NEDD8 | neural precursor cell expressed, developmentally down-regulated 8 |
| NEK2 | NIMA (never in mitosis gene a)-related kinase 2 |
| NHP2L1 | NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) |
| NME1 | non-metastatic cells 1, protein (NM23A) expressed in |
| NME2 | non-metastatic cells 2, protein (NM23B) expressed in |
| NOMO1 (includes others) | NODAL modulator 1 |
| NONO | non-POU domain containing, octamer-binding |
| NOP56 | NOP56 ribonucleoprotein homolog (yeast) |
| NPEPPS | aminopeptidase puromycin sensitive |
| NSD1 | nuclear receptor binding SET domain protein 1 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 |
| NUDT1 | nudix (nucleoside diphosphate linked moiety X)-type motif 1 |
| NUP205 | nucleoporin 205kDa |
| NUP214 | nucleoporin 214kDa |
| NUP85 | nucleoporin 85kDa |
| NUSAP1 | nucleolar and spindle associated protein 1 |
| OGT | O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) |
| OLIG2 | oligodendrocyte lineage transcription factor 2 |
| ORC1 | origin recognition complex, subunit 1 |
| PA2G4 | proliferation-associated 2G4, 38kDa |
| PARP1 | poly (ADP-ribose) polymerase 1 |
| PBK | PDZ binding kinase |
| PCNA | proliferating cell nuclear antigen |
| PDCD5 | programmed cell death 5 |
| PEA15 | phosphoprotein enriched in astrocytes 15 |
| PGK1 | phosphoglycerate kinase 1 |
| PKMYT1 | protein kinase, membrane associated tyrosine/threonine 1 |
| PLK4 | polo-like kinase 4 |
| POLA2 | polymerase (DNA directed), alpha 2 (70kD subunit) |
| POLD1 | polymerase (DNA directed), delta 1, catalytic subunit 125kDa |
| POLE2 | polymerase (DNA directed), epsilon 2 (p59 subunit) |
| POLR2D | polymerase (RNA) II (DNA directed) polypeptide D |
| POLR2K | polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa |
| PPP1CC | protein phosphatase 1, catalytic subunit, gamma isozyme |
| PRC1 | protein regulator of cytokinesis 1 |
| PRKDC | protein kinase, DNA-activated, catalytic polypeptide |
| PSEN2 | presenilin 2 (Alzheimer disease 4) |
| PSMA1 | proteasome (prosome, macropain) subunit, alpha type, 1 |
| PSMA6 | proteasome (prosome, macropain) subunit, alpha type, 6 |
| PSMB3 | proteasome (prosome, macropain) subunit, beta type, 3 |
| PSMB4 | proteasome (prosome, macropain) subunit, beta type, 4 |
| PSMB5 | proteasome (prosome, macropain) subunit, beta type, 5 |
| PSMC1 | proteasome (prosome, macropain) 26S subunit, ATPase, 1 |
| PSMC4 | proteasome (prosome, macropain) 26S subunit, ATPase, 4 |
| PSMC5 | proteasome (prosome, macropain) 26S subunit, ATPase, 5 |
| PSMC6 | proteasome (prosome, macropain) 26S subunit, ATPase, 6 |
| PSMD1 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 |
| PSMD11 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 |
| PSMD14 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 |
| PSMD2 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 |
| PSMD6 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 |
| PSMD8 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 |
| PSME3 | proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) |
| PSPH | phosphoserine phosphatase |
| PTDSS1 | phosphatidylserine synthase 1 |
| PTK2 | PTK2 protein tyrosine kinase 2 |
| PTPN12 | protein tyrosine phosphatase, non-receptor type 12 |
| PTPRF | protein tyrosine phosphatase, receptor type, F |
| PTTG1 | pituitary tumor-transforming 1 |
| PYCR2 | pyrroline-5-carboxylate reductase family, member 2 |
| PYGB | phosphorylase, glycogen; brain |
| RABGGTB | Rab geranylgeranyltransferase, beta subunit |
| RACGAP1 | Rac GTPase activating protein 1 |
| RAD21 | RAD21 homolog (S. pombe) |
| RAN | RAN, member RAS oncogene family |
| RARS | arginyl-tRNA synthetase |
| RBBP4 | retinoblastoma binding protein 4 |
| RBBP7 | retinoblastoma binding protein 7 |
| RBL1 | retinoblastoma-like 1 (p107) |
| RBM17 | RNA binding motif protein 17 |
| RBM3 | RNA binding motif (RNP1, RRM) protein 3 |
| RCN2 | reticulocalbin 2, EF-hand calcium binding domain |
| RFC3 | replication factor C (activator 1) 3, 38kDa |
| RFC4 | replication factor C (activator 1) 4, 37kDa |
| RFC5 | replication factor C (activator 1) 5, 36.5kDa |
| RNF4 | ring finger protein 4 |
| RPA3 | replication protein A3, 14kDa |
| RRAGD | Ras-related GTP binding D |
| RRM1 | ribonucleotide reductase M1 |
| RRM2 | ribonucleotide reductase M2 |
| SCARB2 | scavenger receptor class B, member 2 |
| SGOL2 | shugoshin-like 2 (S. pombe) |
| SLBP | stem-loop binding protein |
| SLC1A4 | solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 |
| SLC25A6 | solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 |
| SLC29A1 | solute carrier family 29 (nucleoside transporters), member 1 |
| SLC35B1 | solute carrier family 35, member B1 |
| SLC39A6 | solute carrier family 39 (zinc transporter), member 6 |
| SMAD3 | SMAD family member 3 |
| SMARCC1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 |
| SMC3 | structural maintenance of chromosomes 3 |
| SMC4 | structural maintenance of chromosomes 4 |
| SMS | spermine synthase |
| SNRPD3 | small nuclear ribonucleoprotein D3 polypeptide 18kDa |
| SNRPE | small nuclear ribonucleoprotein polypeptide E |
| SNRPF | small nuclear ribonucleoprotein polypeptide F |
| SNRPG | small nuclear ribonucleoprotein polypeptide G |
| SNX12 | sorting nexin 12 |
| SOX4 | SRY (sex determining region Y)-box 4 |
| SP3 | Sp3 transcription factor |
| SPINK1 | serine peptidase inhibitor, Kazal type 1 |
| SQLE | squalene epoxidase |
| SRPK1 | SRSF protein kinase 1 |
| SSB | Sjogren syndrome antigen B (autoantigen La) |
| SSBP1 | single-stranded DNA binding protein 1 |
| SSR2 | signal sequence receptor, beta (translocon-associated protein beta) |
| SSRP1 | structure specific recognition protein 1 |
| STMN1 | stathmin 1 |
| STRAP | serine/threonine kinase receptor associated protein |
| SYPL1 | synaptophysin-like 1 |
| TAF9 | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa |
| TARBP1 | TAR (HIV-1) RNA binding protein 1 |
| TARS | threonyl-tRNA synthetase |
| TCEA1 | transcription elongation factor A (SII), 1 |
| TCF12 | transcription factor 12 |
| TDP2 | tyrosyl-DNA phosphodiesterase 2 |
| TIMM17A | translocase of inner mitochondrial membrane 17 homolog A (yeast) |
| TIMM50 | translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) |
| TMCO1 | transmembrane and coiled-coil domains 1 |
| TMEM106C | transmembrane protein 106C |
| TMEM97 | transmembrane protein 97 |
| TMPO | thymopoietin |
| TOMM20 | translocase of outer mitochondrial membrane 20 homolog (yeast) |
| TOP2A | topoisomerase (DNA) II alpha 170kDa |
| TOPBP1 | topoisomerase (DNA) II binding protein 1 |
| TP53BP2 | tumor protein p53 binding protein, 2 |
| TPX2 | TPX2, microtubule-associated, homolog (Xenopus laevis) |
| TRAM1 | translocation associated membrane protein 1 |
| TRIM24 | tripartite motif containing 24 |
| TRIP13 | thyroid hormone receptor interactor 13 |
| TTK | TTK protein kinase |
| TXN | thioredoxin |
| TXNL1 | thioredoxin-like 1 |
| TXNRD1 | thioredoxin reductase 1 |
| TYMS | thymidylate synthetase |
| UBE2A | ubiquitin-conjugating enzyme E2A (RAD6 homolog) |
| UBE2C | ubiquitin-conjugating enzyme E2C |
| UBE2D2 | ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) |
| UBE2T | ubiquitin-conjugating enzyme E2T (putative) |
| UCHL5 | ubiquitin carboxyl-terminal hydrolase L5 |
| UCK2 | uridine-cytidine kinase 2 |
| USP1 | ubiquitin specific peptidase 1 |
| VBP1 | von Hippel-Lindau binding protein 1 |
| VDAC1 | voltage-dependent anion channel 1 |
| VPS13B | vacuolar protein sorting 13 homolog B (yeast) |
| VPS72 | vacuolar protein sorting 72 homolog (S. cerevisiae) |
| WDHD1 | WD repeat and HMG-box DNA binding protein 1 |
| WDR45L | WDR45-like |
| WHSC1 | Wolf-Hirschhorn syndrome candidate 1 |
| XPO1 | exportin 1 (CRM1 homolog, yeast) |
| XPOT | exportin, tRNA (nuclear export receptor for tRNAs) |
| YWHAG | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide |
| YWHAH | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide |
| YWHAZ | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide |
| ZIC2 | Zic family member 2 (odd-paired homolog, Drosophila) |
| ZWILCH | Zwilch, kinetochore associated, homolog (Drosophila) |
| ZWINT | ZW10 interactor |
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The following is the Master Liver Gene List from our analysis.
| Symbol | Entrez Gene Name |
| A2M | alpha-2-macroglobulin |
| AASS | aminoadipate-semialdehyde synthase |
| ABCA8 | ATP-binding cassette, sub-family A (ABC1), member 8 |
| ABCB4 | ATP-binding cassette, sub-family B (MDR/TAP), member 4 |
| ABCC2 | ATP-binding cassette, sub-family C (CFTR/MRP), member 2 |
| ABHD2 | abhydrolase domain containing 2 |
| ABL1 | c-abl oncogene 1, non-receptor tyrosine kinase |
| ABLIM3 | actin binding LIM protein family, member 3 |
| ACAA1 | acetyl-CoA acyltransferase 1 |
| ACAA2 | acetyl-CoA acyltransferase 2 |
| ACADL | acyl-CoA dehydrogenase, long chain |
| ACADS | acyl-CoA dehydrogenase, C-2 to C-3 short chain |
| ACADSB | acyl-CoA dehydrogenase, short/branched chain |
| ACO1 | aconitase 1, soluble |
| ACOX1 | acyl-CoA oxidase 1, palmitoyl |
| ACOX2 | acyl-CoA oxidase 2, branched chain |
| ACSL1 | acyl-CoA synthetase long-chain family member 1 |
| ACSM3 | acyl-CoA synthetase medium-chain family member 3 |
| ACVR2A | activin A receptor, type IIA |
| ACY1 | aminoacylase 1 |
| ADAMDEC1 | ADAM-like, decysin 1 |
| ADAMTS2 | ADAM metallopeptidase with thrombospondin type 1 motif, 2 |
| ADCY5 | adenylate cyclase 5 |
| ADH1B | alcohol dehydrogenase 1B (class I), beta polypeptide |
| ADH1C | alcohol dehydrogenase 1C (class I), gamma polypeptide |
| ADH4 | alcohol dehydrogenase 4 (class II), pi polypeptide |
| ADH5 | alcohol dehydrogenase 5 (class III), chi polypeptide |
| ADH6 | alcohol dehydrogenase 6 (class V) |
| ADHFE1 | alcohol dehydrogenase, iron containing, 1 |
| AEBP1 | AE binding protein 1 |
| AGL | amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase |
| AGXT | alanine-glyoxylate aminotransferase |
| AKAP13 | A kinase (PRKA) anchor protein 13 |
| AKAP7 | A kinase (PRKA) anchor protein 7 |
| ALAS1 | aminolevulinate, delta-, synthase 1 |
| ALAS2 | aminolevulinate, delta-, synthase 2 |
| ALB | albumin |
| ALDH2 | aldehyde dehydrogenase 2 family (mitochondrial) |
| ALDH6A1 | aldehyde dehydrogenase 6 family, member A1 |
| ALDH9A1 | aldehyde dehydrogenase 9 family, member A1 |
| ALDOB | aldolase B, fructose-bisphosphate |
| ALOX5 | arachidonate 5-lipoxygenase |
| AOC3 | amine oxidase, copper containing 3 (vascular adhesion protein 1) |
| APOA1 | apolipoprotein A-I |
| APOB | apolipoprotein B (including Ag(x) antigen) |
| APOC4 | apolipoprotein C-IV |
| APOH | apolipoprotein H (beta-2-glycoprotein I) |
| AQP3 | aquaporin 3 (Gill blood group) |
| AQP9 | aquaporin 9 |
| AR | androgen receptor |
| ARG1 | arginase, liver |
| ASGR1 | asialoglycoprotein receptor 1 |
| ASGR2 | asialoglycoprotein receptor 2 |
| ASPA | aspartoacylase |
| ASS1 | argininosuccinate synthase 1 |
| ATP1A2 | ATPase, Na+/K+ transporting, alpha 2 polypeptide |
| ATP2B1 | ATPase, Ca++ transporting, plasma membrane 1 |
| AXL | AXL receptor tyrosine kinase |
| AZGP1 | alpha-2-glycoprotein 1, zinc-binding |
| BASP1 | brain abundant, membrane attached signal protein 1 |
| BBOX1 | butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 |
| BCKDHB | branched chain keto acid dehydrogenase E1, beta polypeptide |
| BDH1 | 3-hydroxybutyrate dehydrogenase, type 1 |
| BMP6 | bone morphogenetic protein 6 |
| C1R | complement component 1, r subcomponent |
| C1S | complement component 1, s subcomponent |
| C6 | complement component 6 |
| C7 | complement component 7 |
| C8A | complement component 8, alpha polypeptide |
| C8B | complement component 8, beta polypeptide |
| C8orf4 | chromosome 8 open reading frame 4 |
| CA2 | carbonic anhydrase II |
| CALM1 (includes others) | calmodulin 1 (phosphorylase kinase, delta) |
| CAT | catalase |
| CBR4 | carbonyl reductase 4 |
| CBS | cystathionine-beta-synthase |
| CCL2 | chemokine (C-C motif) ligand 2 |
| CCL3 | chemokine (C-C motif) ligand 3 |
| CCND1 | cyclin D1 |
| CCR1 | chemokine (C-C motif) receptor 1 |
| CD14 | CD14 molecule |
| CD2 | CD2 molecule |
| CD302 | CD302 molecule |
| CD53 | CD53 molecule |
| CD5L | CD5 molecule-like |
| CD69 | CD69 molecule |
| CD79A | CD79a molecule, immunoglobulin-associated alpha |
| CD83 | CD83 molecule |
| CD9 | CD9 molecule |
| CDH15 | cadherin 15, type 1, M-cadherin (myotubule) |
| CDO1 | cysteine dioxygenase, type I |
| CEBPD | CCAAT/enhancer binding protein (C/EBP), delta |
| CELF2 | CUGBP, Elav-like family member 2 |
| CFB | complement factor B |
| CFD | complement factor D (adipsin) |
| CFP | complement factor properdin |
| CHI3L2 | chitinase 3-like 2 |
| CLDN10 | claudin 10 |
| COL14A1 | collagen, type XIV, alpha 1 |
| COLEC10 | collectin sub-family member 10 (C-type lectin) |
| CPB2 | carboxypeptidase B2 (plasma) |
| CPT2 | carnitine palmitoyltransferase 2 |
| CR1 | complement component (3b/4b) receptor 1 (Knops blood group) |
| CRADD | CASP2 and RIPK1 domain containing adaptor with death domain |
| CRHBP | corticotropin releasing hormone binding protein |
| CRISPLD2 | cysteine-rich secretory protein LCCL domain containing 2 |
| CSF1R | colony stimulating factor 1 receptor |
| CSPG5 | chondroitin sulfate proteoglycan 5 (neuroglycan C) |
| CTAGE5 | CTAGE family, member 5 |
| CTSW | cathepsin W |
| CXCL1 | chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) |
| CXCL12 | chemokine (C-X-C motif) ligand 12 |
| CXCL14 | chemokine (C-X-C motif) ligand 14 |
| CXCL2 | chemokine (C-X-C motif) ligand 2 |
| CXCL3 | chemokine (C-X-C motif) ligand 3 |
| CYB5A | cytochrome b5 type A (microsomal) |
| CYBB | cytochrome b-245, beta polypeptide |
| CYP17A1 | cytochrome P450, family 17, subfamily A, polypeptide 1 |
| CYP1A1 | cytochrome P450, family 1, subfamily A, polypeptide 1 |
| CYP26A1 | cytochrome P450, family 26, subfamily A, polypeptide 1 |
| CYP2A6 (includes others) | cytochrome P450, family 2, subfamily A, polypeptide 6 |
| CYP2B6 | cytochrome P450, family 2, subfamily B, polypeptide 6 |
| CYP2C18 | cytochrome P450, family 2, subfamily C, polypeptide 18 |
| CYP2C8 | cytochrome P450, family 2, subfamily C, polypeptide 8 |
| CYP2C9 | cytochrome P450, family 2, subfamily C, polypeptide 9 |
| CYP2E1 | cytochrome P450, family 2, subfamily E, polypeptide 1 |
| CYP2J2 | cytochrome P450, family 2, subfamily J, polypeptide 2 |
| CYP3A5 | cytochrome P450, family 3, subfamily A, polypeptide 5 |
| CYP3A7 | cytochrome P450, family 3, subfamily A, polypeptide 7 |
| CYP4A11 | cytochrome P450, family 4, subfamily A, polypeptide 11 |
| CYP4F12 | cytochrome P450, family 4, subfamily F, polypeptide 12 |
| DAPK1 | death-associated protein kinase 1 |
| DCN | decorin |
| DCT | dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) |
| DCXR | dicarbonyl/L-xylulose reductase |
| DLG4 | discs, large homolog 4 (Drosophila) |
| DMD | dystrophin |
| DNASE1L3 | deoxyribonuclease I-like 3 |
| DPP4 | dipeptidyl-peptidase 4 |
| DPT | dermatopontin |
| DPYS | dihydropyrimidinase |
| DSG1 | desmoglein 1 |
| DTNB | dystrobrevin, beta |
| ECHDC2 | enoyl CoA hydratase domain containing 2 |
| ECHS1 | enoyl CoA hydratase, short chain, 1, mitochondrial |
| EDNRB | endothelin receptor type B |
| EGR1 | early growth response 1 |
| EIF2B2 | eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa |
| EPB41L3 | erythrocyte membrane protein band 4.1-like 3 |
| EPHX2 | epoxide hydrolase 2, cytoplasmic |
| ERCC4 | excision repair cross-complementing rodent repair deficiency, complementation group 4 |
| ERG | v-ets erythroblastosis virus E26 oncogene homolog (avian) |
| ETV6 | ets variant 6 |
| EVL | Enah/Vasp-like |
| F11 | coagulation factor XI |
| F2 | coagulation factor II (thrombin) |
| FAAH | fatty acid amide hydrolase |
| FAH | fumarylacetoacetate hydrolase (fumarylacetoacetase) |
| FAM46C | family with sequence similarity 46, member C |
| FBLN5 | fibulin 5 |
| FBP1 | fructose-1,6-bisphosphatase 1 |
| FBXO21 | F-box protein 21 |
| FCN2 | ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin) |
| FEZ1 | fasciculation and elongation protein zeta 1 (zygin I) |
| FGF2 | fibroblast growth factor 2 (basic) |
| FGG | fibrinogen gamma chain |
| FGR | Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog |
| FLT4 | fms-related tyrosine kinase 4 |
| FMO2 | flavin containing monooxygenase 2 (non-functional) |
| FOLH1 | folate hydrolase (prostate-specific membrane antigen) 1 |
| FOS | FBJ murine osteosarcoma viral oncogene homolog |
| FOSB | FBJ murine osteosarcoma viral oncogene homolog B |
| FOXO1 | forkhead box O1 |
| FPR1 | formyl peptide receptor 1 |
| FRK | fyn-related kinase |
| FYN | FYN oncogene related to SRC, FGR, YES |
| GABARAPL1 | GABA(A) receptor-associated protein like 1 |
| GCDH | glutaryl-CoA dehydrogenase |
| GCH1 | GTP cyclohydrolase 1 |
| GHR | growth hormone receptor |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GLT8D2 | glycosyltransferase 8 domain containing 2 |
| GLYAT | glycine-N-acyltransferase |
| GNA14 | guanine nucleotide binding protein (G protein), alpha 14 |
| GNAO1 | guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O |
| GNG2 | guanine nucleotide binding protein (G protein), gamma 2 |
| GPD1 | glycerol-3-phosphate dehydrogenase 1 (soluble) |
| GPM6A | glycoprotein M6A |
| GPR18 | G protein-coupled receptor 18 |
| GRAMD1C | GRAM domain containing 1C |
| GSTA3 | glutathione S-transferase alpha 3 |
| GSTZ1 | glutathione transferase zeta 1 |
| GYS2 | glycogen synthase 2 (liver) |
| H2AFV | H2A histone family, member V |
| HAAO | 3-hydroxyanthranilate 3,4-dioxygenase |
| HAL | histidine ammonia-lyase |
| HAMP | hepcidin antimicrobial peptide |
| HAO1 | hydroxyacid oxidase (glycolate oxidase) 1 |
| HBD | hemoglobin, delta |
| HCK | hemopoietic cell kinase |
| HGF | hepatocyte growth factor (hepapoietin A; scatter factor) |
| HIBCH | 3-hydroxyisobutyryl-CoA hydrolase |
| HMGCL | 3-hydroxymethyl-3-methylglutaryl-CoA lyase |
| HMGCS2 | 3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial) |
| HP | haptoglobin |
| HPD | 4-hydroxyphenylpyruvate dioxygenase |
| HPX | hemopexin |
| HRG | histidine-rich glycoprotein |
| HSD11B1 | hydroxysteroid (11-beta) dehydrogenase 1 |
| ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein |
| ID2 | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein |
| ID2B | inhibitor of DNA binding 2B, dominant negative helix-loop-helix protein (pseudogene) |
| IFI44L | interferon-induced protein 44-like |
| IFITM1 | interferon induced transmembrane protein 1 (9-27) |
| IFNAR1 | interferon (alpha, beta and omega) receptor 1 |
| IGF1 | insulin-like growth factor 1 (somatomedin C) |
| IGF2 | insulin-like growth factor 2 (somatomedin A) |
| IGFBP1 | insulin-like growth factor binding protein 1 |
| IGFBP3 | insulin-like growth factor binding protein 3 |
| IGHD | immunoglobulin heavy constant delta |
| IL12RB1 | interleukin 12 receptor, beta 1 |
| IL1B | interleukin 1, beta |
| IL1RAP | interleukin 1 receptor accessory protein |
| IL2RB | interleukin 2 receptor, beta |
| IL4R | interleukin 4 receptor |
| IL6ST | interleukin 6 signal transducer (gp130, oncostatin M receptor) |
| INPP5E | inositol polyphosphate-5-phosphatase, 72 kDa |
| IQGAP1 | IQ motif containing GTPase activating protein 1 |
| IRF8 | interferon regulatory factor 8 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) |
| ITGA9 | integrin, alpha 9 |
| ITGAL | integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) |
| ITIH4 | inter-alpha (globulin) inhibitor H4 (plasma Kallikrein-sensitive glycoprotein) |
| ITIH5 | inter-alpha (globulin) inhibitor H5 |
| JAG2 | jagged 2 |
| JUN | jun proto-oncogene |
| KAL1 | Kallmann syndrome 1 sequence |
| KBTBD11 | kelch repeat and BTB (POZ) domain containing 11 |
| KCNMA1 | potassium large conductance calcium-activated channel, subfamily M, alpha member 1 |
| KHK | ketohexokinase (fructokinase) |
| KLF9 | Kruppel-like factor 9 |
| KLKB1 | kallikrein B, plasma (Fletcher factor) 1 |
| KMO | kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) |
| KRT7 | keratin 7 |
| KYNU | kynureninase |
| LAMC2 | laminin, gamma 2 |
| LARP4 | La ribonucleoprotein domain family, member 4 |
| LCAT | lecithin-cholesterol acyltransferase |
| LGMN | legumain |
| LIFR | leukemia inhibitory factor receptor alpha |
| LIPC | lipase, hepatic |
| LMO7 | LIM domain 7 |
| LPA | lipoprotein, Lp(a) |
| LST1 | leukocyte specific transcript 1 |
| LTK | leukocyte receptor tyrosine kinase |
| LY75 | lymphocyte antigen 75 |
| MAN1C1 | mannosidase, alpha, class 1C, member 1 |
| MARCO | macrophage receptor with collagenous structure |
| MASP2 | mannan-binding lectin serine peptidase 2 |
| MBL2 | mannose-binding lectin (protein C) 2, soluble |
| MBNL2 | muscleblind-like 2 (Drosophila) |
| MCC | mutated in colorectal cancers |
| MEF2A | myocyte enhancer factor 2A |
| METTL7A | methyltransferase like 7A |
| MFAP3L | microfibrillar-associated protein 3-like |
| MFAP4 | microfibrillar-associated protein 4 |
| MGST2 | microsomal glutathione S-transferase 2 |
| MME | membrane metallo-endopeptidase |
| MMP14 | matrix metallopeptidase 14 (membrane-inserted) |
| MRC2 | mannose receptor, C type 2 |
| MRPL46 | mitochondrial ribosomal protein L46 |
| MS4A6A | membrane-spanning 4-domains, subfamily A, member 6A |
| MST1 | macrophage stimulating 1 (hepatocyte growth factor-like) |
| MT-TP | tRNA |
| MT1B | metallothionein 1B |
| MT1E | metallothionein 1E |
| MT1H | metallothionein 1H |
| MT1X | metallothionein 1X |
| MTHFD1 | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase |
| MUSK | muscle, skeletal, receptor tyrosine kinase |
| MXRA5 | matrix-remodelling associated 5 |
| MYBPC2 | myosin binding protein C, fast type |
| MYD88 | myeloid differentiation primary response gene (88) |
| MYH10 | myosin, heavy chain 10, non-muscle |
| MYO10 | myosin X |
| NAT1 | N-acetyltransferase 1 (arylamine N-acetyltransferase) |
| NAT2 | N-acetyltransferase 2 (arylamine N-acetyltransferase) |
| NELL2 | NEL-like 2 (chicken) |
| NFIL3 | nuclear factor, interleukin 3 regulated |
| NKG7 | natural killer cell group 7 sequence |
| NNMT | nicotinamide N-methyltransferase |
| NPY1R | neuropeptide Y receptor Y1 |
| NR3C2 | nuclear receptor subfamily 3, group C, member 2 |
| NR4A1 | nuclear receptor subfamily 4, group A, member 1 |
| NRP2 | neuropilin 2 |
| NRXN2 | neurexin 2 |
| NTRK2 | neurotrophic tyrosine kinase, receptor, type 2 |
| OLFM1 | olfactomedin 1 |
| OLFML1 | olfactomedin-like 1 |
| OLFML3 | olfactomedin-like 3 |
| ORM1/ORM2 | orosomucoid 1 |
| ORM1/ORM2 | orosomucoid 1 |
| OSBPL5 | oxysterol binding protein-like 5 |
| PAPPA | pregnancy-associated plasma protein A, pappalysin 1 |
| PCBD1 | pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha |
| PCK1 | phosphoenolpyruvate carboxykinase 1 (soluble) |
| PCK2 | phosphoenolpyruvate carboxykinase 2 (mitochondrial) |
| PCOLCE | procollagen C-endopeptidase enhancer |
| PDE1A | phosphodiesterase 1A, calmodulin-dependent |
| PDE1C | phosphodiesterase 1C, calmodulin-dependent 70kDa |
| PDE4D | phosphodiesterase 4D, cAMP-specific |
| PDE4DIP | phosphodiesterase 4D interacting protein |
| PDE7B | phosphodiesterase 7B |
| PDGFRA | platelet-derived growth factor receptor, alpha polypeptide |
| PDLIM5 | PDZ and LIM domain 5 |
| PEBP1 | phosphatidylethanolamine binding protein 1 |
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 |
| PHYH | phytanoyl-CoA 2-hydroxylase |
| PLA2G4A | phospholipase A2, group IVA (cytosolic, calcium-dependent) |
| PLAC8 | placenta-specific 8 |
| PLAU | plasminogen activator, urokinase |
| PLCB2 | phospholipase C, beta 2 |
| PLD3 | phospholipase D family, member 3 |
| PLEK | pleckstrin |
| PLG | plasminogen |
| PLIN2 | perilipin 2 |
| PLP1 | proteolipid protein 1 |
| PLTP | phospholipid transfer protein |
| PON1 | paraoxonase 1 |
| PON3 | paraoxonase 3 |
| PPAP2B | phosphatidic acid phosphatase type 2B |
| PPP1R13B | protein phosphatase 1, regulatory (inhibitor) subunit 13B |
| PRELP | proline/arginine-rich end leucine-rich repeat protein |
| PRKAA1 | protein kinase, AMP-activated, alpha 1 catalytic subunit |
| PRKCH | protein kinase C, eta |
| PRKCQ | protein kinase C, theta |
| PRKG1 | protein kinase, cGMP-dependent, type I |
| PRRX1 | paired related homeobox 1 |
| PRTN3 | proteinase 3 |
| PTGIS | prostaglandin I2 (prostacyclin) synthase |
| PTGR1 | prostaglandin reductase 1 |
| PTGS1 | prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) |
| PTGS2 | prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) |
| PTH1R | parathyroid hormone 1 receptor |
| PTPN13 | protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) |
| PTPRC | protein tyrosine phosphatase, receptor type, C |
| PYGL | phosphorylase, glycogen, liver |
| PZP | pregnancy-zone protein |
| QDPR | quinoid dihydropteridine reductase |
| RAPGEF2 | Rap guanine nucleotide exchange factor (GEF) 2 |
| RASGEF1B | RasGEF domain family, member 1B |
| RBP4 | retinol binding protein 4, plasma |
| RBP5 | retinol binding protein 5, cellular |
| RCAN1 | regulator of calcineurin 1 |
| RCOR1 | REST corepressor 1 |
| RELN | reelin |
| RGN | regucalcin (senescence marker protein-30) |
| RHOB | ras homolog gene family, member B |
| RNASE4 | ribonuclease, RNase A family, 4 |
| RXRG | retinoid X receptor, gamma |
| SAA4 | serum amyloid A4, constitutive |
| SC5DL | sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like |
| SCAF11 | SR-related CTD-associated factor 11 |
| SCARF1 | scavenger receptor class F, member 1 |
| SELE | selectin E |
| SELP | selectin P (granule membrane protein 140kDa, antigen CD62) |
| SEMA3C | sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C |
| SERPINA1 | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 |
| SERPING1 | serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 |
| SHMT2 | serine hydroxymethyltransferase 2 (mitochondrial) |
| SKAP1 | src kinase associated phosphoprotein 1 |
| SLC10A1 | solute carrier family 10 (sodium/bile acid cotransporter family), member 1 |
| SLC17A3 | solute carrier family 17 (sodium phosphate), member 3 |
| SLC17A7 | solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 |
| SLC1A1 | solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 |
| SLC1A2 | solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
| SLC22A1 | solute carrier family 22 (organic cation transporter), member 1 |
| SLC27A5 | solute carrier family 27 (fatty acid transporter), member 5 |
| SLC41A1 | solute carrier family 41, member 1 |
| SLC4A4 | solute carrier family 4, sodium bicarbonate cotransporter, member 4 |
| SLC6A8 | solute carrier family 6 (neurotransmitter transporter, creatine), member 8 |
| SMAD6 | SMAD family member 6 |
| SMARCA2 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 |
| SOCS3 | suppressor of cytokine signaling 3 |
| SOD1 | superoxide dismutase 1, soluble |
| SORL1 | sortilin-related receptor, L(DLR class) A repeats containing |
| SOX17 | SRY (sex determining region Y)-box 17 |
| SPIB | Spi-B transcription factor (Spi-1/PU.1 related) |
| SPON1 | spondin 1, extracellular matrix protein |
| SPP2 | secreted phosphoprotein 2, 24kDa |
| SRD5A2 | steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2) |
| SRPX | sushi-repeat containing protein, X-linked |
| ST3GAL6 | ST3 beta-galactoside alpha-2,3-sialyltransferase 6 |
| ST8SIA4 | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 |
| STAB1 | stabilin 1 |
| SULT4A1 | sulfotransferase family 4A, member 1 |
| TACSTD2 | tumor-associated calcium signal transducer 2 |
| TBXA2R | thromboxane A2 receptor |
| TBXAS1 | thromboxane A synthase 1 (platelet) |
| TCN1 | transcobalamin I (vitamin B12 binding protein, R binder family) |
| TDO2 | tryptophan 2,3-dioxygenase |
| TEK | TEK tyrosine kinase, endothelial |
| TF | transferrin |
| TFAP2A | transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) |
| TGFB1I1 | transforming growth factor beta 1 induced transcript 1 |
| TGFBR2 | transforming growth factor, beta receptor II (70/80kDa) |
| TGFBR3 | transforming growth factor, beta receptor III |
| TGM2 | transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) |
| THBS1 | thrombospondin 1 |
| TIAM1 | T-cell lymphoma invasion and metastasis 1 |
| TNFRSF1A | tumor necrosis factor receptor superfamily, member 1A |
| TNXB | tenascin XB |
| TPSAB1/TPSB2 | tryptase alpha/beta 1 |
| TRAM2 | translocation associated membrane protein 2 |
| UAP1 | UDP-N-acteylglucosamine pyrophosphorylase 1 |
| UCP2 | uncoupling protein 2 (mitochondrial, proton carrier) |
| UGT2B15 | UDP glucuronosyltransferase 2 family, polypeptide B15 |
| UGT2B4 | UDP glucuronosyltransferase 2 family, polypeptide B4 |
| UGT2B7 | UDP glucuronosyltransferase 2 family, polypeptide B7 |
| ULK2 | unc-51-like kinase 2 (C. elegans) |
| VAV1 | vav 1 guanine nucleotide exchange factor |
| VIPR1 | vasoactive intestinal peptide receptor 1 |
| VNN1 | vanin 1 |
| VSIG4 | V-set and immunoglobulin domain containing 4 |
| WNT11 | wingless-type MMTV integration site family, member 11 |
| WNT2 | wingless-type MMTV integration site family member 2 |
| YES1 | v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 |
| ZAP70 | zeta-chain (TCR) associated protein kinase 70kDa |
| ZG16 | zymogen granule protein 16 homolog (rat) |
| ZNF185 | zinc finger protein 185 (LIM domain) |
| ZNF238 | zinc finger protein 238 |
The following 7 Gene Sets had highly significant enrichment scores for uninvolved liver genes adjacent to HCCs. All Gene Sets are from the msigdb_v2.5.xml database from the Gene Set Enrichment Analysis software available from the Broad Institute (http://www.broadinstitute.org/gsea/index.jsp).
1. FETAL_LIVER_VS_ADULT_LIVER_GNF2
Genes upregulated in fetal liver vs adult liver
Contributed to GSEA by Jean-Pierre Bourquin
| ABCC3 | ATP-binding cassette, sub-family C (CFTR/MRP), member 3 |
| ABHD2 | abhydrolase domain containing 2 |
| ACY1 | aminoacylase 1 |
| ADH1C | alcohol dehydrogenase 1C (class I), gamma polypeptide |
| APCS | amyloid P component, serum |
| APOC4 | apolipoprotein C-IV |
| AQP9 | aquaporin 9 |
| ASL | argininosuccinate lyase |
| AZGP1 | alpha-2-glycoprotein 1, zinc |
| C1R | complement component 1, r subcomponent |
| C6orf108 | chromosome 6 open reading frame 108 |
| C8G | complement component 8, gamma polypeptide |
| CD14 | CD14 molecule |
| CD151 | CD151 molecule (Raph blood group) |
| CD81 | CD81 molecule |
| CES1 | carboxylesterase 1 (monocyte/macrophage serine esterase 1) |
| CES2 | carboxylesterase 2 (intestine, liver) |
| CLPP | ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli) |
| COMT | catechol-O-methyltransferase |
| CYP1A2 | cytochrome P450, family 1, subfamily A, polypeptide 2 |
| CYP27A1 | cytochrome P450, family 27, subfamily A, polypeptide 1 |
| CYP2A6 | cytochrome P450, family 2, subfamily A, polypeptide 6 |
| CYP2B6 | cytochrome P450, family 2, subfamily B, polypeptide 6 |
| CYP2C8 | cytochrome P450, family 2, subfamily C, polypeptide 8 |
| CYP2C9 | cytochrome P450, family 2, subfamily C, polypeptide 9 |
| CYP2E1 | cytochrome P450, family 2, subfamily E, polypeptide 1 |
| CYP4A11 | cytochrome P450, family 4, subfamily A, polypeptide 11 |
| DCPS | decapping enzyme, scavenger |
| DEXI | – |
| DKFZp451J0118 |
|